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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809243.1_cds_XP_016495669.1_9965
CDS Infomation

[gene=LOC107814732] [db_xref=GeneID:107814732] [protein=probable pectate lyase P18] [protein_id=XP_016495669.1] [location=join(21845..21951,22033..22397,22488..23008,23393..23617)] [gbkey=CDS]
Sequence

ATGTCAAGCCTTCTCTTCATATTTGTTCTTTTTGTCACACTACTTCTAACCCCACTACTT
GTTTCTTCAATCCAAGATCCAGAGCTTGTGGTACAAGAAGTTCATAGGAGCATCAATGCT
TCATTGACAAGGAGGAACTTGGGCTATTTGTCGTGTGGAACAGGAAATCCGATTGATGAT
TGTTGGCGTTGTGACCCCAATTGGGAGAAAAATCGCCAGCGTTTAGCTGATTGTGCCATT
GGCTTTGGAAAGAATGCTATTGGAGGAAGAAATGGAAGAATTTACGTGGTCACTGACTCA
GGAAACGATGACCCAGTCAACCCCAGGCCCGGAACCCTTAGACATGCGGTTATACAAGAT
GAGCCTTTGTGGATCATTTTCAAAAGAGACATGGTCATTCAGCTCAAGCAAGAACTTGTC
ATGAACTCTTTCAAGACCATAGACGGTCGAGGCACCAGCGTTCACATATCAGGTGGTCCT
TGCATTACAATCCATTACAGCACGAACATTATTATACACGGGATTAATATACACGACTGC
AAGCAGAGTGGTAACGGCAACATTAGGGACTCACCGCACCATTCCGGATGGTGGGATGTT
TCCGACGGAGACGGCATTTCAATTTTCGGAGGAAAGAATATTTGGGTAGATCATTGCTCC
TTGTCAAATTGCCACGACGGTCTAATTGATGCAATTCATGGATCCACAGCAATTACCATT
TCTAACAACTACTTTACTCATCATGATAAGGTCATGTTATTGGGGCATAGTGATTCTTTT
ACGCAGGACAAAGGCATGCAAGTTACAGTTGCCTTTAATCATTTTGGTGAAGGGTTGGTG
CAGAGAATGCCGAGGTGTAGACATGGTTATTTCCATGTGGTGAACAATGACTACACCCAC
TGGGAAATGTATGCCATTGGTGGTAGTGCTGCCCCTACTATTAATAGTCAAGGCAACAGG
TTTCTTGCTCCCAATCAGAAATTCAACAAAGAGGTGACAAAGCATGAGGATGCACCAGAA
AGTGAGTGGAGAAGCTGGAACTGGAGGTCAGAAGGTGACTTGATGTTAAATGGTGCCTAT
TTCAGGCAAACAGGTGCAGGTGCATCATCTTCTACTTATGCTAGGGCATCAAGCTTAAGT
GCAAGGCCTTCTACCTTGGTTGGATCCATGACCACAAGCGCCGGTCCTCTCAACTGCAAA
ATAAGTTCTCGCTGCTAG

Peptide Sequence

PEP ID

XP_016495669.1
PEP Infomation

PREDICTED: probable pectate lyase P18 [Nicotiana tabacum]
Sequence

MSSLLFIFVLFVTLLLTPLLVSSIQDPELVVQEVHRSINASLTRRNLGYLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDPVNPRPGTLRHAVIQD
EPLWIIFKRDMVIQLKQELVMNSFKTIDGRGTSVHISGGPCITIHYSTNIIIHGINIHDC
KQSGNGNIRDSPHHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITI
SNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSAAPTINSQGNRFLAPNQKFNKEVTKHEDAPESEWRSWNWRSEGDLMLNGAY
FRQTGAGASSSTYARASSLSARPSTLVGSMTTSAGPLNCKISSRC

Transcript Sequence

Gene sequence data has not been registered.